PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG021324.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family Trihelix
Protein Properties Length: 952aa    MW: 102464 Da    PI: 5.8544
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG021324.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix43.39.4e-1427118187
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                  +W+++ + +L++a  ++  +l+rg+l++++W++v++++     + ++  r+ +qCk++++ ++k+yk +k +  + + +  s +p+f++l+a
  CCG021324.1  27 CWSEEATSTLVDAWGRRYLELNRGNLRQKDWQDVADAVnalhgHTKKTYRTDVQCKNRIDTIKKKYKIEKSHVVSSNGTLASAWPFFERLDA 118
                  7**************************************9999999999***********************9999888889*******985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.0E-2525119No hitNo description
PfamPF059222.6E-9299377IPR010259Peptidase S8 propeptide/proteinase inhibitor I9
Gene3DG3DSA:3.40.50.2006.7E-77352574IPR000209Peptidase S8/S53 domain
SuperFamilySSF527434.06E-71377572IPR000209Peptidase S8/S53 domain
CDDcd048528.03E-134377768No hitNo description
PRINTSPR007235.1E-19401420IPR015500Peptidase S8, subtilisin-related
PfamPF000823.0E-55401773IPR000209Peptidase S8/S53 domain
PROSITE patternPS001360406417IPR023827Peptidase S8, subtilisin, Asp-active site
PRINTSPR007235.1E-19463476IPR015500Peptidase S8, subtilisin-related
CDDcd021203.37E-34566667No hitNo description
PfamPF022251.7E-13578653IPR003137PA domain
Gene3DG3DSA:3.50.30.306.8E-12579664No hitNo description
SuperFamilySSF520256.8E-8586685No hitNo description
SuperFamilySSF527434.06E-71628805IPR000209Peptidase S8/S53 domain
Gene3DG3DSA:3.40.50.2006.7E-77676805IPR000209Peptidase S8/S53 domain
PRINTSPR007235.1E-19731747IPR015500Peptidase S8, subtilisin-related
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006508Biological Processproteolysis
GO:0004252Molecular Functionserine-type endopeptidase activity
Sequence ? help Back to Top
Protein Sequence    Length: 952 aa     Download sequence    Send to blast
MGDLIESSSV TPSTTPHSRP LPIREDCWSE EATSTLVDAW GRRYLELNRG NLRQKDWQDV  60
ADAVNALHGH TKKTYRTDVQ CKNRIDTIKK KYKIEKSHVV SSNGTLASAW PFFERLDALI  120
GSNFNSSGKK HLSPSPPVAL PLPPSYRRTP QVSSTPPPQP PALAVALPQK RPLPVDDGYF  180
RRNYSAMAAA AAAVESDSEE DEDEEFEGGD GERAEEDVEG EGIKRLALAI ERFGEVYERV  240
ESEKLKQMVD LEKQRMKFAK DLEMERMRIF TETQVQLEKI KKGKPLRTSE TSQKGKFETY  300
IVFVQKPEGG VSADDLDGWY KSFLPVTIPS SNHQERMVYS YRHVATGFAA KLTAEEAKAM  360
EDKDGFLSAK PQKILSLQTT HSPNFLGLQK NLGFWRNSTY GKGVIIGVLD TGISPDHPSF  420
SDEGVPPPPT KWKGKCNFNG TVCNNKLIGA RDFTSSKAAP PFDEVGHGTH TASTAAGNFV  480
NDASVFGNAN GTAVGMAPLA HLAIYKVCSD FGCTESDILA AMDAAVEDGV DVLSLSLGGG  540
SAPFFEDSIA VGAFGATQKG IFVSCSAGNE GAHGSQSAAF CAPESLTDID VKGKIVLCER  600
GGGIARIDKG QAVKDAGGAA MILMNDKDSG YSTLADAHVL PASHVSYSAG LSIKAYINST  660
QVPTATIMFL GTKIGDKTAP TVASFSSRGP SMASPGILKP DIIGPGVSIL AAWPVSVENR  720
TDKKSTFNII SGTSMSCPHL SGIAALLKSA HPDWSPAAIK SAIMTTADLV NLGNQPILDE  780
RLLPADILAT GAGHVNPSKA SDPGLVYDIQ PDDYVPYLCG LGYPDRDISY IVQRQVKCSE  840
KSSILEAQLN YPSFSIVYGP NPATQTYTRT VTNVGPPNSF YTAFVDPPPG VNVTVTPNNI  900
IFTNTEQTAT YSVTFTATSE SNNDPIGQGY IRWVSDKHSI RSQILVSFSN ED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3i74_B1e-1053799471643Subtilisin-like protease
3i74_A1e-1053799471643Subtilisin-like protease
3i6s_B1e-1053799471643Subtilisin-like protease
3i6s_A1e-1053799471643Subtilisin-like protease
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011034012.10.0PREDICTED: uncharacterized protein LOC105132300
TrEMBLB9GW360.0B9GW36_POPTR; Uncharacterized protein
STRINGPOPTR_0003s11860.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.17e-38sequence-specific DNA binding transcription factors