PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG019123.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family TCP
Protein Properties Length: 299aa    MW: 32082.4 Da    PI: 9.1344
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG019123.2genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1195.9e-3780178399
          TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssgkaaksaaksk 98 
                   k+ +++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++  +   +  ++ nsssg  +++a+k++
  CCG019123.2  80 LKRPSTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsvNGTLKIPTTTNSSSGLGQPNATKNR 177
                  6899***********************************************************88888444322222222222222222222222222 PP

          TCP  99 k 99 
                  k
  CCG019123.2 178 K 178
                  2 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.4E-3084174IPR005333Transcription factor, TCP
PROSITE profilePS5136927.18785139IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MASTQKQELG EDEDMRTVDL RINSRELPNI RACPTNRKDC NDMSAALKEE PSTEERSPPP  60
PLGVMPLAAV SMPLTTVTPL KRPSTKDRHT KVEGRGRRIR MPAACAARIF QLTRELGHKS  120
DGETIRWLLE HAEPAIIAAT GTGTVPAIAM SVNGTLKIPT TTNSSSGLGQ PNATKNRKRP  180
ANSEYVDVND TVSVSASLVP VTTQQPPPPA TTNSCGSATG FSAHVGHTIQ CCRSRGVLYV  240
AVPVSGSMTA KGISMMAPSS SSACTVSTTS TTTNRTPQML RDFSLEIYDK QELQFMSRS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024450071.11e-137transcription factor TCP9
SwissprotO646479e-73TCP9_ARATH; Transcription factor TCP9
TrEMBLB9GPT71e-135B9GPT7_POPTR; Uncharacterized protein
STRINGPOPTR_0002s15360.11e-136(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21183086
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.15e-71TCP family protein