PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG018118.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family TCP
Protein Properties Length: 176aa    MW: 19274.6 Da    PI: 6.7902
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG018118.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP99.75.1e-311494582
          TCP  5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssa 82
                  ++ +++h+kv+gRdRR+Rl+++caar+F+L++eLG ++d++tieWLl+ a+p i++ tg +  + +      ++++++++
  CCG018118.1 14 PKPRKDRHAKVNGRDRRIRLPVNCAARVFQLTQELGNKTDGETIEWLLRVAEPTIIAVTGKGIGTTNTIrgyAQAARVNTK 94
                 5788*********************************************************55555444332222222222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036348.7E-2817103IPR005333Transcription factor, TCP
PROSITE profilePS5136923.5791771IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MNKASSSKTK VTDPKPRKDR HAKVNGRDRR IRLPVNCAAR VFQLTQELGN KTDGETIEWL  60
LRVAEPTIIA VTGKGIGTTN TIRGYAQAAR VNTKSVSYSD IHPSVSTGLL SPLTDPSEPR  120
SMEPIRTQGL ISTNCEVSAD EPLSFPSEFG NLETNFDMEF PVNGMFPSVS GNDHEE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010999530.11e-129PREDICTED: transcription factor TCP22-like
TrEMBLA0A2K1Z0T11e-114A0A2K1Z0T1_POPTR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38193363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.19e-29TCP family protein