PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG010631.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family TCP
Protein Properties Length: 332aa    MW: 35511.4 Da    PI: 10.6288
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG010631.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP120.61.8e-37651682106
          TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaaksk 98 
                  ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai ++tgt++ +a ++    +   +  + +s++a++++++ k
  CCG010631.1  65 PPKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIVAATGTGTVPAIAMsV--NGTLKIPTTTSSSAEPDEPNAK 160
                  6899************************************************************9888855531..2222222222223333333333 PP

          TCP  99 ksqksaas 106
                  k++k++a+
  CCG010631.1 161 KKRKRPAN 168
                  33333322 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036345.0E-3170164IPR005333Transcription factor, TCP
PROSITE profilePS5136926.76971125IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008361Biological Processregulation of cell size
GO:0048364Biological Processroot development
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MTTADLRINS GELRNFRGGP TSKKNYNDMS AAPKEEPCTE DRSPTPPLAV VPFAAIPMPL  60
NTVTPPKRAS TKDRHTKVEG RGRRIRMPAT CAARIFQLTR ELGHKSDGET IRWLLEHAEP  120
AIVAATGTGT VPAIAMSVNG TLKIPTTTSS SAEPDEPNAK KKRKRPANSE YVDVNDSVSV  180
SASLAPITTR QPPQPQAQPP VTAVPQGLVP MWAIPSNTVV PGAFFMVPSM PGPSNQPQIF  240
TFPAAASPLI NISPRPISSF VSSMQSNIAV ALPVSGSKPG KGISMTAPSS SSAHTTRTTS  300
TTTNSTPQML RDFSLEIYDK QELQFMSRSS KQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00667PBMTransfer from GSVIVG01027588001Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011035583.10.0PREDICTED: transcription factor TCP9-like
SwissprotO646473e-97TCP9_ARATH; Transcription factor TCP9
TrEMBLA0A3N7FY680.0A0A3N7FY68_POPTR; Uncharacterized protein
STRINGPOPTR_0014s07450.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21183086
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.15e-79TCP family protein