PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_41524
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 192aa    MW: 21454.9 Da    PI: 5.2438
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_41524genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.88.7e-162069255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr +k +g+Wv+e+r p++   r r++lg+++++e+Aa+a +a    l+g
  PEQU_41524 20 KYKGVRKRK-WGKWVSEVRLPNS---RERIWLGSYDSPEKAARAFDAGSFLLRG 69
                8*****999.*******999833...5*****************9986666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.74E-272079No hitNo description
Gene3DG3DSA:3.30.730.101.5E-272078IPR001471AP2/ERF domain
SMARTSM003806.3E-272083IPR001471AP2/ERF domain
PfamPF008471.4E-92062IPR001471AP2/ERF domain
PROSITE profilePS5103221.3382077IPR001471AP2/ERF domain
SuperFamilySSF541713.86E-192079IPR016177DNA-binding domain
PRINTSPR003674.3E-92132IPR001471AP2/ERF domain
PRINTSPR003674.3E-94359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0002213Biological Processdefense response to insect
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009611Biological Processresponse to wounding
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MANPVESTAA AAFAASAAVK YKGVRKRKWG KWVSEVRLPN SRERIWLGSY DSPEKAARAF  60
DAGSFLLRGH RASLNFPDQI QDISMYCSRL NPTSQQIQIA AARYAHADYP AQSQPSEQPV  120
LQPAECSPSP SPSLSPAANH WEYMDQLISP TVMGIHDFSS YDLTNPSEQF AQMDLDAENC  180
YDFVRSSDLW EF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1420791474Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12127KGVRKRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00601PBMTransfer from AT1G74930Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020595118.11e-142ethylene-responsive transcription factor ERF018-like
TrEMBLA0A2I0WF117e-66A0A2I0WF11_9ASPA; Ethylene-responsive transcription factor ERF018
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.17e-32ERF family protein