PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_38670
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 132aa    MW: 15169.2 Da    PI: 9.8868
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_38670genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.78.2e-1284105122
                 ---SS-EEEEEEE--TT-SS-E CS
        WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                 ldDgy+WrKYGqK vk+++fpr
  PEQU_38670  84 LDDGYRWRKYGQKAVKNNNFPR 105
                 59*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-1369105IPR003657WRKY domain
SuperFamilySSF1182903.27E-1076106IPR003657WRKY domain
PROSITE profilePS5081112.85179105IPR003657WRKY domain
SMARTSM007749.4E-584128IPR003657WRKY domain
PfamPF031063.5E-885106IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MEKYNITSAS STFCAHHNYS HSEAIQMNNL HALEKKEVFE MDGGDDDDVK GSSIGVSGGK  60
KKKGEKKVRR PRFAFQTRSQ VDILDDGYRW RKYGQKAVKN NNFPRYIILL YSPFFSNFLG  120
TIYIFVSVIN MV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020589897.13e-73probable WRKY transcription factor 43
STRINGTraes_2AS_D0C21ADB5.11e-25(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3750633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.11e-19WRKY DNA-binding protein 75