PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_38344
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 250aa    MW: 26557.8 Da    PI: 8.2799
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_38344genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-203079255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  PEQU_38344 30 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 79
                58*******.**********8...557************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.3E-323088IPR001471AP2/ERF domain
PfamPF008475.9E-143079IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-223089IPR016177DNA-binding domain
CDDcd000184.41E-193087No hitNo description
PROSITE profilePS5103223.9333087IPR001471AP2/ERF domain
SMARTSM003801.7E-393093IPR001471AP2/ERF domain
PRINTSPR003675.3E-113142IPR001471AP2/ERF domain
PRINTSPR003675.3E-115369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MAPREKGTGA GRSGGNGISA SCEGGGKEMH FRGVRKRPWG RYAAEIRDPG KKSRVWLGTF  60
DTAEEAARAY DAAAREFRGS KAKTNFPCSE NYKSPSPIVN GGGAAGSPSS QSSTVESSVR  120
EAVSIVPPLA TPIPPLELNL LHPGASRFPF QHFQPATMAV AHPLFFLDPF VRSEQAGAMA  180
ATVTIAGHNG NHLLALKQPI ILSEFNAPVN SSANSDSESS SVVDLQHSLP LVRHHSLNID  240
LNLPPPEEFV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-222791267ATERF1
3gcc_A9e-222791267ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020590933.10.0ethylene-responsive transcription factor 4-like
TrEMBLA0A2I0W6W31e-115A0A2I0W6W3_9ASPA; Ethylene-responsive transcription factor 9
STRINGXP_008789749.15e-50(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38463174
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-26erf domain protein 9