PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_31514
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family DBB
Protein Properties Length: 189aa    MW: 20454.1 Da    PI: 6.1298
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_31514genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box17.49.1e-06445541
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                 C+ +e   ++l C  ++  lC  C ++ H        H++ p
  PEQU_31514  4 QCDVCETT-ASLLCCADEAALCWGCDEKVHAAnklagkHQRLP 45
                7*****99.*********************6678888898877 PP

2zf-B_box29.12.1e-0957100238
    zf-B_box   2 eerkCpeHeeke.lqlfCedCqqllCedClleeHkg......Ht 38 
                 ++++C+ ++ek   ++fC +++ llC+ C l++H+       H+
  PEQU_31514  57 KMPCCDICQEKTgFSFFCLEDRALLCRHCDLTIHSAspvvsnHQ 100
                 689*******999*********************6566666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.314146IPR000315B-box-type zinc finger
CDDcd000211.66E-4346No hitNo description
SMARTSM003363.0E-9446IPR000315B-box-type zinc finger
SMARTSM003361.9E-1056104IPR000315B-box-type zinc finger
PfamPF006431.2E-657101IPR000315B-box-type zinc finger
PROSITE profilePS501198.5661104IPR000315B-box-type zinc finger
CDDcd000211.44E-561104No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MKIQCDVCET TASLLCCADE AALCWGCDEK VHAANKLAGK HQRLPLLFPG PSSTTFKMPC  60
CDICQEKTGF SFFCLEDRAL LCRHCDLTIH SASPVVSNHQ RFLITGVRVG LQHSVTDNNG  120
SCRGRAATNE LSSSSGSVSS SGNLPVSLAT KSLGVEKTDD FKLCWPWNEI FEGVDFDHCY  180
GLSEPGSSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009383444.17e-70PREDICTED: probable salt tolerance-like protein At1g78600
RefseqXP_009383445.17e-70PREDICTED: probable salt tolerance-like protein At1g78600
SwissprotQ9SYM23e-49BBX22_ARATH; B-box zinc finger protein 22
TrEMBLM0RRP77e-70M0RRP7_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr11P12670_0012e-69(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP121512528
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.16e-50light-regulated zinc finger protein 1