PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_30280
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 332aa    MW: 37019.4 Da    PI: 8.9429
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_30280genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.31.8e-052322701154
                 HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  R +++ ++++ L++l+ +      +K   a++L ++veYIk+L
  PEQU_30280 232 VRKEKLGDKINALQQLVSPF-----GKTATASVLHETVEYIKYL 270
                 67788999*********998.....8*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.553221270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0066227276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-9231278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000830.00104231274No hitNo description
Gene3DG3DSA:4.10.280.101.8E-8235278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MAEDFQPCNV WWNNSRSSSF NGSQAINSSS DSFSWLPANK TSESKPRLCG QKTDNSFSMH  60
QEDIDSRPFY RQQLGESSAT VPLSEMNFCT SSSVSSTYVS SSSMPTVLAE RDKSFQQPFF  120
DSQEMAYHGF SNETLEPSWN KLPPVFKEFS HKQQSDINQL QFTSTIPFWN DSAGFCPSAL  180
PSSGIQLFES KPGCSMTVKS LEEVSDMKTS NESEMKKPRI ETLSPLPAAF KVRKEKLGDK  240
INALQQLVSP FGKTATASVL HETVEYIKYL HDQVNEKKKR GGVPGRSIVG ERSSLELARR  300
RKGKLAEPGG RLDAKRGNNI STSSNRNHIA RV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020685740.22e-65uncharacterized protein LOC110101967
TrEMBLA0A2I0WKN05e-62A0A2I0WKN0_9ASPA; Uncharacterized protein
STRINGXP_008789835.11e-42(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22163787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05170.13e-25bHLH family protein