PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_29268
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 232aa    MW: 25077.1 Da    PI: 8.7771
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_29268genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY941.1e-2990148259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK+ k++++pr+YYrC++a  Cpvkkkv+rs++d+ +++ tYegeHnh+
  PEQU_29268  90 RDGYQWRKYGQKVTKDNPCPRAYYRCSFApICPVKKKVQRSTDDQGILVATYEGEHNHH 148
                 7***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081126.3684150IPR003657WRKY domain
SuperFamilySSF1182901.16E-2588150IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.7E-2988150IPR003657WRKY domain
SMARTSM007743.8E-3489149IPR003657WRKY domain
PfamPF031069.4E-2591148IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002237Biological Processresponse to molecule of bacterial origin
GO:0002238Biological Processresponse to molecule of fungal origin
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009611Biological Processresponse to wounding
GO:0009623Biological Processresponse to parasitic fungus
GO:0009651Biological Processresponse to salt stress
GO:0009685Biological Processgibberellin metabolic process
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0009938Biological Processnegative regulation of gibberellic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:1990841Molecular Functionpromoter-specific chromatin binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MLADMCESYD ELRARMMDMI GSTAELASSD GARSGSPTPA KRKSCENASN AANSVSSGCS  60
FKKAKEEVSK PKISKLYART DPSDSGLVVR DGYQWRKYGQ KVTKDNPCPR AYYRCSFAPI  120
CPVKKKVQRS TDDQGILVAT YEGEHNHHQP SPADVQNAIS RRTAEPADGF GAAGDLAKKD  180
SRTEGVEAQQ AEQSERLVKS MASSLTTDPN FTAIMTAAIS GRLFAIPTPQ GK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-21881501374WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020599903.11e-173probable WRKY transcription factor 40
TrEMBLA0A2R4LUZ01e-122A0A2R4LUZ0_CYMEN; Putative WRKY transcription factor 40
STRINGXP_008802353.11e-66(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP182238103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-57WRKY DNA-binding protein 40