PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_29266
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 169aa    MW: 18949.3 Da    PI: 10.4493
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_29266genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.76.4e-25101157259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dg++W+KYGqK++++s +pr+Y+rC++a  Cpvkk  +r++ed +vv++tYegeHnh 
  PEQU_29266 101 RDGHHWKKYGQKVIRDSSYPRAYFRCSFApVCPVKK--KRCTEDHSVVVVTYEGEHNHV 157
                 7***************************99******..79******************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081120.46195159IPR003657WRKY domain
SuperFamilySSF1182907.59E-2195158IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.9E-2496159IPR003657WRKY domain
SMARTSM007742.5E-26100158IPR003657WRKY domain
PfamPF031061.1E-19102156IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MNRVVAENRR LSTLLAAISE RHRALRAQVL KMISSSSSSS SSSSKTAGSK RNSEGSITYL  60
ASTNESYKEN CSSYRSSRQA VSEARPRISK MYIRSDGLNV RDGHHWKKYG QKVIRDSSYP  120
RAYFRCSFAP VCPVKKKRCT EDHSVVVVTY EGEHNHVQPL PGHSHNGLC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-161001621476WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2I0W2L05e-78A0A2I0W2L0_9ASPA; Putative WRKY transcription factor 40
STRINGXP_008790665.14e-38(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129212834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-33WRKY DNA-binding protein 40