PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_22603
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 167aa    MW: 18932.6 Da    PI: 4.124
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_22603genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.42.2e-26160258
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
                dDg++WrKYGqK++ ++++prsY+rCt++   gC++ k+v+rs++d ++++itY g+H++
  PEQU_22603  1 DDGHTWRKYGQKDIFSAKYPRSYFRCTHKfdqGCKASKQVQRSEDDDSLFVITYFGDHTC 60
                7***************************9999**************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-25163IPR003657WRKY domain
SMARTSM007742.8E-35162IPR003657WRKY domain
PROSITE profilePS5081122.159163IPR003657WRKY domain
PfamPF031062.8E-25160IPR003657WRKY domain
SuperFamilySSF1182909.29E-24161IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
DDGHTWRKYG QKDIFSAKYP RSYFRCTHKF DQGCKASKQV QRSEDDDSLF VITYFGDHTC  60
VDPSKAMIPP SRELCVISFE SSNGENVEKG TPFSFPSLNQ EGEEEVISNL TSADSASDYF  120
VSPENELEQS ALEQNGLPAA LYSSFMSYGT DFMDDENFLN FDHTDMF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-23160968OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020584387.11e-124probable WRKY transcription factor 70
TrEMBLA0A2I0WGT34e-91A0A2I0WGT3_9ASPA; Putative WRKY transcription factor 70
STRINGGSMUA_Achr5P07490_0017e-41(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-26WRKY DNA-binding protein 70