PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_18150
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 178aa    MW: 20655.3 Da    PI: 6.3896
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_18150genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY621.1e-191880359
                -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS...STTEEEEEEES--SS- CS
        WRKY  3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae...dpkvveitYegeHnhe 59
                Dg++WrKYGqK + +s +prsYY+Ct++   gCp++k +++++e    p   ++ Y+ +H+++
  PEQU_18150 18 DGHQWRKYGQKRILNSMYPRSYYKCTHHkdqGCPATKTIQQKEEkffKPPKYTVSYNMQHTCK 80
                9**************************99999********998733346788999**9*9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.7E-22381IPR003657WRKY domain
SuperFamilySSF1182909.42E-20981IPR003657WRKY domain
SMARTSM007741.4E-271681IPR003657WRKY domain
PROSITE profilePS5081115.4571858IPR003657WRKY domain
PfamPF031067.9E-231880IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
TRKKTQSWTI STSVPHFDGH QWRKYGQKRI LNSMYPRSYY KCTHHKDQGC PATKTIQQKE  60
EKFFKPPKYT VSYNMQHTCK PKETQEIPFV MDSSAITNTS CSTNIVSSTY SSNEILPLQV  120
EEMEQDCLME SMLLSSEPRE EVNATHEDLL RSSLAALDFD WGWHDELIAF EAFGNVML
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-1418801069OsWRKY45
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020575342.11e-134probable WRKY transcription factor 70
TrEMBLA0A2I0WQZ01e-60A0A2I0WQZ0_9ASPA; Putative WRKY transcription factor 70
STRINGXP_008788524.14e-37(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP203235100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-18WRKY DNA-binding protein 70