PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_17654
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 290aa    MW: 32683.5 Da    PI: 5.1383
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_17654genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.41.7e-24120179258
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                 dDgy+WrKYGqKe+ ++++pr+Y+rCt +   gC+++++v++s++dp   +itY g+H++
  PEQU_17654 120 DDGYAWRKYGQKEIFNAKYPRNYFRCTNKydrGCEATRQVQKSEDDPFSYVITYFGKHTC 179
                 8**************************99999**************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-24112180IPR003657WRKY domain
SuperFamilySSF1182901.44E-23113180IPR003657WRKY domain
PROSITE profilePS5081121.895114182IPR003657WRKY domain
SMARTSM007746.8E-36119181IPR003657WRKY domain
PfamPF031064.1E-23120179IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MDSLEAEGSS PPAMIAVIAE LTKVRQSVAA LANLRLVDPL ELPTAKLLVE QTASSISKAF  60
AVLESEKGRN HTEAQVGSPS SDVTIRSPVE KRKIQNTRKA TNRKRGNPYS WKRITSATID  120
DGYAWRKYGQ KEIFNAKYPR NYFRCTNKYD RGCEATRQVQ KSEDDPFSYV ITYFGKHTCG  180
AEKENNPRCK EPCVTSFESN AVNGTKQEIP FSSFSSPQQE NEEEGSKLTS CNSLSNYFEL  240
PEELQKPSMI ELEPDWSDSW PGLNSSITSY DMEFMELGDI LGFDQNKFFT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-25114179368OsWRKY45
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020596807.10.0probable WRKY transcription factor 46
TrEMBLA0A2P1JML72e-71A0A2P1JML7_9ASPA; WRKY transcription factor 29-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-27WRKY DNA-binding protein 70