PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_16193
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family NAC
Protein Properties Length: 267aa    MW: 30027.9 Da    PI: 6.7031
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_16193genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.72.8e-33441831128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWk 84 
                 lp G++F+Ptd+el+  +L +kv ++       ++  e+i++v+    i++++P++Lp  vk + + ++fF+++ k+y+tg+rk+r+++     + +W+
  PEQU_16193  44 LPHGVKFDPTDHELL-WHLIAKVGKSGgsphpfIN--EFIPTVEkddgICYTHPQKLP-GVKMDGSVTHFFHRTFKAYNTGTRKRRKINtedhgDVRWH 138
                 699************.6677777666657765422..23444422235**********.566688999******************74444655788** PP

         NAM  85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 +tgk+k+v+  +g + g+kk++v+y    +  k+ekt+Wvmh+y+l
  PEQU_16193 139 KTGKTKPVVL-DGDQQGCKKIMVLYasAVKGGKAEKTNWVMHQYHL 183
                 **********.9999**********5444777888*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-3733202IPR003441NAC domain
PROSITE profilePS5100530.09344202IPR003441NAC domain
PfamPF023651.3E-1445183IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MLGLKASVFS LCRFQQQQDF SVPVQVPTST TVDLPAVIQE WPGLPHGVKF DPTDHELLWH  60
LIAKVGKSGG SPHPFINEFI PTVEKDDGIC YTHPQKLPGV KMDGSVTHFF HRTFKAYNTG  120
TRKRRKINTE DHGDVRWHKT GKTKPVVLDG DQQGCKKIMV LYASAVKGGK AEKTNWVMHQ  180
YHLGTGEDEK DGEFVVSKIF YQQQFKPFER GRVEPIIENE ETGSGEMETV MCAGSSTPDY  240
HGENQHLIKI SEISDQADLI QTYSAEN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008800751.11e-108PREDICTED: NAC domain-containing protein 8 isoform X3
RefseqXP_008800749.11e-107PREDICTED: NAC domain-containing protein 8 isoform X1
SwissprotQ6NQK27e-90NAC8_ARATH; NAC domain-containing protein 8
TrEMBLJ3MD491e-105J3MD49_ORYBR; Uncharacterized protein
STRINGOB06G19430.11e-104(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-90NAC family protein