PlantRegMap
Plant Transcription Factor Database
PlantTFDB
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14700
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 93aa    MW: 10745.5 Da    PI: 7.5114
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14700genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.63e-157871795
                E--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-....TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
          B3 17 vlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvlt....kGWkeFvkangLkegDfvvFkldgr.sefelvvk 95
                ++p +fa +h  +    ++++ l++ + + W+vk++++  s++  lt    kGW++Fv++n L+egD ++F l+++ +e  l v+
  PEQU_14700  7 IFPSDFAVKHlRLR---PQKIFLRH-QDKMWSVKYKFEVASNGGSLTglsgKGWRRFVEDNALCEGDGCIFVLSESeKEMVLDVH 87
                57999**9996444...44688777.8899*****9955555534444445*********************9975455545555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.379192IPR003340B3 DNA binding domain
SMARTSM010198.4E-5492IPR003340B3 DNA binding domain
SuperFamilySSF1019366.87E-15791IPR015300DNA-binding pseudobarrel domain
CDDcd100171.63E-11790No hitNo description
PfamPF023622.5E-12786IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.4E-15890IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
MIYILQIFPS DFAVKHLRLR PQKIFLRHQD KMWSVKYKFE VASNGGSLTG LSGKGWRRFV  60
EDNALCEGDG CIFVLSESEK EMVLDVHIVR VDD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020690296.26e-38B3 domain-containing protein Os12g0592300
RefseqXP_028550059.16e-38B3 domain-containing protein Os12g0592300
RefseqXP_028550060.16e-38B3 domain-containing protein Os12g0592300
TrEMBLA0A2I0X1032e-38A0A2I0X103_9ASPA; B3 domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58531172
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-09B3 family protein