PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_13530
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GeBP
Protein Properties Length: 321aa    MW: 35444.9 Da    PI: 9.5434
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_13530genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573102.34e-3253151297
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 +fq+lw++ De+ +LqG+ +f++++g+   ++++d+  f++ ++ +++f+++k+q+veK+rrLKkK+++ v+++ sgk  +f+++hd+ ++e+s+kiW 
  PEQU_13530  53 MFQKLWTDADEMKVLQGFYEFTSRRGTthaNYQHDTGPFFDDIRTRLQFQFNKNQIVEKLRRLKKKYRNAVARIGSGKGSVFKSPHDRATYEISRKIWS 151
                 79************************98867777****************************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.7E-3054151IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MPSAGDHHRS ATLAAGVSGD GSDEATDSED LGAFDRNRRW SSSSGGSEES RRMFQKLWTD  60
ADEMKVLQGF YEFTSRRGTT HANYQHDTGP FFDDIRTRLQ FQFNKNQIVE KLRRLKKKYR  120
NAVARIGSGK GSVFKSPHDR ATYEISRKIW SSTWKRKPRN PPHSETPLTY PDQTLAVSCG  180
SESAVVQVAV AESSARVPHG IPILVSSLSG PPQPTHSPPP PPLQAPATKT GHTVEEDALR  240
ICLAPLFKEL LQSALDGATT AGAVAPPLWV LTALTAAEAS GKKDERWRLQ QILELELYLK  300
RLELVEESVR SALEKLRSMG S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573497.10.0probable transcription factor At3g04930
TrEMBLA0A2I0WQY51e-108A0A2I0WQY5_9ASPA; Mediator-associated protein 1
STRINGXP_008807916.15e-82(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.27e-37DNA-binding storekeeper protein-related transcriptional regulator