PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09661
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family WRKY
Protein Properties Length: 432aa    MW: 46915.3 Da    PI: 7.327
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09661genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.96.4e-31211269259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  PEQU_09661 211 ADGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDRSILITTYEGNHNHP 269
                 7***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.6E-34195271IPR003657WRKY domain
SuperFamilySSF1182904.84E-28203271IPR003657WRKY domain
PROSITE profilePS5081129.516205271IPR003657WRKY domain
SMARTSM007742.7E-37210270IPR003657WRKY domain
PfamPF031063.4E-27212269IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
ANTGSDQSTL DEGMSITEDE KEGKTELAAM QTELGRMTEE NQRLRGMLSQ VTNNYNALQM  60
HFMTLMQQQN QINKIGFSQA QAAVSDEQLK KQDNVGVAIA PRQFMDLGPA AADADEPSTH  120
SSTDGGSQDR SSQSLVNKDI STNSKEMIVF EREDSGFVRE ESPENSSHVW AANNHSKASG  180
TGLKPAEQSQ EATMRKARVS VRARSEAPMI ADGCQWRKYG QKMAKGNPCP RAYYRCTMAT  240
GCPVRKQVQR CAEDRSILIT TYEGNHNHPL PPPAMAMAST TSAAASMLLS GSMPSNDGLM  300
NSNVLARTIL PCSSSMATIS ASAPFPTVTL DLTQTANSLQ YQQRPPSQFH LPPPLPPPQP  360
SSLPHLFGQA IYNQSKFSGL QMSSAEVAKP PHNFADTVSA ATAAITSDPN FAGSRPRHNV  420
DHRWNASSRK QQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-22197272175WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00428DAPTransfer from AT4G04450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020575205.10.0LOW QUALITY PROTEIN: WRKY transcription factor 42-like
SwissprotQ9XEC31e-139WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A2I0WV400.0A0A2I0WV40_9ASPA; Putative WRKY transcription factor 42
STRINGXP_010252466.11e-165(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP52653656
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.11e-118WRKY family protein