PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09030
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GeBP
Protein Properties Length: 96aa    MW: 11366.9 Da    PI: 10.915
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09030genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573544.7e-172488263
      DUF573  2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKk 63
                +fq+lw+  De+ +LqG+ +f++k+g+   +++ d+  f++++  +++f+++k+q+ eK rr Kk
  PEQU_09030 24 MFQKLWTHADELKVLQGFFEFTSKKGTthaNYQYDTGPFFNQIWPRLQFNFNKNQIAEKQRRPKK 88
                79************************98855555***************************9887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.5E-132588IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    Send to blast
MIGIGDHIHR QIANTSKGEE SRRMFQKLWT HADELKVLQG FFEFTSKKGT THANYQYDTG  60
PFFNQIWPRL QFNFNKNQIA EKQRRPKKST TTLPPR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020590480.12e-50probable transcription factor At3g04930
TrEMBLA0A2I0WQY56e-45A0A2I0WQY5_9ASPA; Mediator-associated protein 1
STRINGXP_008807916.15e-28(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.27e-18DNA-binding storekeeper protein-related transcriptional regulator