PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_05123
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GeBP
Protein Properties Length: 270aa    MW: 30413.5 Da    PI: 9.917
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_05123genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573101.95.5e-3224122297
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 +fq+lw+  De+ +LqG+++f++k+g+   ++++d+  f++ ++ +++f+++k+q+ eK+rrLKkK+++  +k+ sg+ ++f+++hd+ ++e+s+kiW 
  PEQU_05123  24 MFQKLWTHADEMKVLQGFLEFTSKRGTthaNYQHDTGPFFNEIRPRLQFDFNKNQIAEKLRRLKKKYRNAAAKIGSGRGFVFKSPHDRATYEISRKIWS 122
                 79************************98867777****************************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.1E-3025122IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MIGISDHIHR QIANTSGGEE SRRMFQKLWT HADEMKVLQG FLEFTSKRGT THANYQHDTG  60
PFFNEIRPRL QFDFNKNQIA EKLRRLKKKY RNAAAKIGSG RGFVFKSPHD RATYEISRKI  120
WSTKIWSTTT FYRKPKNRSN QEDRSGGVGG SEVTNFPAAL DCFASASPPS LAEEIGPVPP  180
PSKTEDVAAA AAGQSVEEEA VRICLAPVFK ELVQFAVAGA TTAPPIALAV EGDERWRQQR  240
IMELELYLKR MELVEEWVRS SLEKLRSLGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020590480.10.0probable transcription factor At3g04930
TrEMBLA0A2I0WQY51e-151A0A2I0WQY5_9ASPA; Mediator-associated protein 1
STRINGXP_008807916.11e-75(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.15e-50DNA-binding storekeeper protein-related transcriptional regulator