PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_04799
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 136aa    MW: 14588.3 Da    PI: 8.5033
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_04799genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-1381128455
                 HHHHHHH.HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerEr.rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn  E+ rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  PEQU_04799  81 VHNLSEKvRRRSRINEKMRALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 128
                 599999967889***************7.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.51E-1774133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.59678127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.85E-1680132No hitNo description
PfamPF000105.7E-1181128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-1781132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-1583133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MDSNCGGGPS CSSAAQEQIS CFFGEQVHPP FSSSAAGCRE RSGFSITEKP ELAVEAVGEG  60
AKPVASTRSG SGSKRSRAAE VHNLSEKVRR RSRINEKMRA LQNLIPNSNK TDKASMLDEA  120
IEYLKQLQLQ VQVSGC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010932049.13e-34PREDICTED: transcription factor SPATULA
SwissprotO805362e-31PIF3_ARATH; Transcription factor PIF3
TrEMBLQ0DEA74e-34Q0DEA7_ORYSJ; Os06g0164400 protein (Fragment)
TrEMBLM0RGN01e-33M0RGN0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P09040_0013e-33(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33363776
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.15e-27bHLH family protein