PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_04506
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 99aa    MW: 11061.8 Da    PI: 11.8996
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_04506genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.12.5e-143777246
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaa 46
                ++ GVr+++ +grWvAeI+d +   ++ r +lg+f tae Aa a+
  PEQU_04506 37 KFVGVRRRP-SGRWVAEIKDTT---QKIRMWLGTFETAEAAALAY 77
                899******.7*********32...35**********88888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.69E-203777No hitNo description
PfamPF008478.4E-103776IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.5E-193779IPR001471AP2/ERF domain
SuperFamilySSF541714.84E-143782IPR016177DNA-binding domain
SMARTSM003801.6E-153799IPR001471AP2/ERF domain
PROSITE profilePS5103215.4223777IPR001471AP2/ERF domain
PRINTSPR003672.3E-73849IPR001471AP2/ERF domain
PRINTSPR003672.3E-76076IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    Send to blast
MDLHPKQQIT HLSPLQSTKF KPKTKLSINS GGGAANKFVG VRRRPSGRWV AEIKDTTQKI  60
RMWLGTFETA EAAALAYPHQ LLQPPPLSRR RFPGGHSHP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010044941.14e-23PREDICTED: ethylene-responsive transcription factor RAP2-11
SwissprotQ6J9S12e-21RA211_ARATH; Ethylene-responsive transcription factor RAP2-11
TrEMBLA0A059D8K74e-23A0A059D8K7_EUCGR; Uncharacterized protein
STRINGPOPTR_0003s21090.12e-21(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39003273
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-22related to AP2 11