PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_03301
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GeBP
Protein Properties Length: 102aa    MW: 11986.7 Da    PI: 10.7113
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_03301genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57378.88.6e-25293997
      DUF573  9 eeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
                 +D + +LqG+++f+ k+g+   ++++d+  f++ ++ +++f+++k+q++eK  rLKkK+++  +k+ sg+ ++++++hdq ++e+s+kiW 
  PEQU_03301  2 HTDGMKVLQGFLEFTLKRGTthtNYQHDTGPFFNEIRPRLQFDFNKNQITEKQCRLKKKYRNAATKMGSGRGFVLKSPHDQATYEISHKIWS 93
                68999**************98867777****************************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.3E-23293IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
THTDGMKVLQ GFLEFTLKRG TTHTNYQHDT GPFFNEIRPR LQFDFNKNQI TEKQCRLKKK  60
YRNAATKMGS GRGFVLKSPH DQATYEISHK IWSTTFFRLG FL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020590480.11e-54probable transcription factor At3g04930
RefseqXP_020673830.11e-54probable transcription factor At5g28040
SwissprotQ9CAV78e-28STKLJ_ARATH; Probable transcription factor At3g04930
TrEMBLA0A2I0WQY53e-53A0A2I0WQY5_9ASPA; Mediator-associated protein 1
STRINGXP_008807916.11e-42(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.28e-31DNA-binding storekeeper protein-related transcriptional regulator