PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_03244
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 281aa    MW: 31303.9 Da    PI: 5.0112
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_03244genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.1e-1759107355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + GVr+++ +gr++AeIrdp +   + r++lg+f+ta+eAa a+++a+ +l+g
  PEQU_03244  59 FLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAFEAALAYDKAAISLKG 107
                 56******.**********843...4************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.3E-3058121IPR001471AP2/ERF domain
PROSITE profilePS5103220.03358115IPR001471AP2/ERF domain
CDDcd000182.06E-2758114No hitNo description
SuperFamilySSF541717.19E-1959115IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.7E-2759114IPR001471AP2/ERF domain
PRINTSPR003674.5E-75970IPR001471AP2/ERF domain
PfamPF008473.3E-1061107IPR001471AP2/ERF domain
PRINTSPR003674.5E-78197IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MFFNSQTLKR RTQQPSEQTL APTQNGIPLL NHPYIHHISS NLPTTEKRGR RRITEPGRFL  60
GVRRRPWGRY AAEIRDPATK ERHWLGTFDT AFEAALAYDK AAISLKGAQA RTNFIYPELS  120
SISSFPLSSN QTLTLASSST SSPNLTSPHP LPLPLPSNQT SDDFPCEFEF YGDTKSGDLS  180
SIVTESSLRC ATSKSCGLNT EVLDFSPPSE VVPSDDFSRV VSKVEEGNHD LGCLMEEPLW  240
ELSPSQTAMN GQVRAGSEAA LMENWCWTDD VFDYDYCPLF L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1849114571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020572617.10.0ethylene-responsive transcription factor ESR2-like
TrEMBLA0A2I0VJW71e-124A0A2I0VJW7_9ASPA; Ethylene-responsive transcription factor ERF086
STRINGXP_008802124.16e-43(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18853397
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.16e-38ERF family protein