PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_01824
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 134aa    MW: 15033.1 Da    PI: 11.4199
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_01824genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.2e-174796255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +gr++AeIrdp     +  r +lg+f+tae+Aa a++ a+++++g
  PEQU_01824 47 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEQAAWAYDIAARAMRG 96
                6********.**********93....35999**********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.57E-2446106No hitNo description
SuperFamilySSF541717.19E-2247105IPR016177DNA-binding domain
SMARTSM003801.9E-3347110IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-2947104IPR001471AP2/ERF domain
PROSITE profilePS5103222.73447104IPR001471AP2/ERF domain
PfamPF008471.1E-104796IPR001471AP2/ERF domain
PRINTSPR003679.9E-104859IPR001471AP2/ERF domain
PRINTSPR003679.9E-107086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009735Biological Processresponse to cytokinin
GO:0009880Biological Processembryonic pattern specification
GO:0010084Biological Processspecification of organ axis polarity
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
SLSLSSINNS FLPTTKPPTP MEDHTNRTLV KRPAATSSPP PPKDAARYRG VRRRPWGRYA  60
AEIRDPQSKE RRWLGTFDTA EQAAWAYDIA ARAMRGLKAR TNFQYLPPHA AAATPPPQPP  120
PFPPPDFPWR HVGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-20461031371Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020570621.17e-75ethylene-responsive transcription factor 12-like
TrEMBLA0A2I0X1636e-53A0A2I0X163_9ASPA; Ethylene-responsive transcription factor ESR2
STRINGGSMUA_Achr9P01870_0011e-36(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18853397
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.17e-22DORNROSCHEN-like