PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s790611g005
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family C2H2
Protein Properties Length: 153aa    MW: 17063.7 Da    PI: 9.7956
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s790611g005genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.00164264123
                       EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                       y+C  C+++F++   L  H  +H
  PDK_30s790611g005 42 YECRTCNRRFPTFQALGGHRTSH 64
                       99**********99998888777 PP

2zf-C2H213.80.0001787109123
                        EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                        ++Cp Cg  F+    L  H+r+H
  PDK_30s790611g005  87 HECPVCGLEFPMGQALGGHMRRH 109
                        79********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575123No hitNo description
SuperFamilySSF576672.62E-840109No hitNo description
PfamPF139121.2E-114166IPR007087Zinc finger, C2H2
SMARTSM003550.174264IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.934269IPR007087Zinc finger, C2H2
PROSITE patternPS0002804464IPR007087Zinc finger, C2H2
PfamPF139125.9E-1286110IPR007087Zinc finger, C2H2
SMARTSM003550.05987109IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.18287114IPR007087Zinc finger, C2H2
PROSITE patternPS00028089109IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MAGREEGEVE STNLANVLLL LSCNGAKARN IHGIKKPMGR VYECRTCNRR FPTFQALGGH  60
RTSHMRTRFR RDWVEETKKE RKKPRVHECP VCGLEFPMGQ ALGGHMRRHK PTEADEACTG  120
KKAGAGKVLW LDLNLTPSEN DLELTALGLG LAV
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010920697.23e-97zinc finger protein ZAT12
SwissprotQ9SLD48e-25ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A2H3YAC26e-74A0A2H3YAC2_PHODC; zinc finger protein ZAT11-like
STRINGXP_008794835.11e-109(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50137157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.12e-33C2H2 family protein