PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s787781g005
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 426aa    MW: 43964.2 Da    PI: 7.3033
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s787781g005genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.36.2e-22302365164
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                        e+elkrerrk +NRe+ArrsR+RK++e+eeL++kv+eL +eN+aL  e+e+lkk +  lk+e+e
  PDK_30s787781g005 302 ERELKRERRKLSNRESARRSRLRKQQECEELARKVDELNGENSALTLEVENLKKFCRDLKAENE 365
                        89**********************************************************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.0E-1745127IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165965.5E-8142272No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-16297362No hitNo description
PfamPF001707.7E-20302365IPR004827Basic-leucine zipper domain
SMARTSM003385.3E-20302366IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.806304367IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.75E-11305361No hitNo description
CDDcd147023.02E-20307358No hitNo description
PROSITE patternPS000360309324IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MGSAEETTTA GAAAEKPSRT EAAASTSPAS PALAAAPPPP PPSSSRESPT PAQTPPQVAA  60
HVFSDWAASL QAFYGSGAAA AAAAAAAAAA APHPFVWGAQ HLVSPYGTPI AYSPMYSHGA  120
LYSHPSMAVG MAYPTTEPSD NKGSSGNAGG SPGKSGDGGK VSSSTAENAS RSSGDSGSEG  180
SSDTRDDNTE PRDLSSSKKR SYGNMMAEVE TAQPITAAQY GGAVAEPSYS SRGRSATKLP  240
VSAPGRIVLT SPPTNLNIGM DLWNASHAGA VPVRARPTKA GIATATGRWD GVTTEQQRIQ  300
DERELKRERR KLSNRESARR SRLRKQQECE ELARKVDELN GENSALTLEV ENLKKFCRDL  360
KAENESLEAG LTRFFGAGVA SALGCKVESS AAESSAVPSV GGDGSDHVHK SQVDSNRNNG  420
KFHSGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1304311LKRERRKL
2318324RRSRLRK
3318325RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008786127.10.0G-box-binding factor 1-like isoform X1
TrEMBLA0A2H3XN780.0A0A2H3XN78_PHODC; G-box-binding factor 1-like isoform X1
STRINGXP_008786126.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.21e-31G-box binding factor 1