PlantTFDB
Plant Transcription Factor Database
PlantRegMap/PlantTFDB v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s705771g006
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 407aa    MW: 44012.3 Da    PI: 8.7386
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s705771g006genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.84.4e-22314376163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v +L++eN +Lk+ele++   ++kl+se+
  PDK_30s705771g006 314 ERELKRQKRKQSNRESARRSRLRKQAECEELANRVMTLKEENNSLKEELERMHGDCDKLTSEN 376
                        89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165961.8E-27155276No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-18308373No hitNo description
SMARTSM003381.7E-20314378IPR004827Basic-leucine zipper domain
PfamPF001703.6E-20314376IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.599316379IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-11317373No hitNo description
CDDcd147025.87E-21319365No hitNo description
PROSITE patternPS000360321336IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MRRRLAGETL NLVLYDGLLE YHSNISLSIP RYTKLMKNSP KPDKLTSCSH LNHNKQLTEL  60
SLYKFDVLYQ GISFDIEGPE QPPSSPAMVY PDWASFQVLR SNRSSFCMLF VQVSSNLGSC  120
PYSPYPMPSA NGIAEASVAG ASGAETDGKL RGGKERSPPK KSRGSLGSLN MLTGKTYFHK  180
NHVYSGESGS EGSSEGSDAD SQNGSQRNHG SEHGSGDEEA QKGSTARTTS NEVTHTPSTP  240
IVSNPTVPFV TIPPGGLAGP TTTLNIGMDY WGGSASISAL RGKVPAAPSM APLVPSGLAG  300
SQNSVPPDPS MQDERELKRQ KRKQSNRESA RRSRLRKQAE CEELANRVMT LKEENNSLKE  360
ELERMHGDCD KLTSENASLA VFGGLPKIFF LESNLFPKLA SRKAPCG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1330336RRSRLRK
2330337RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008798449.11e-176bZIP transcription factor 16-like isoform X1
RefseqXP_026663050.11e-176bZIP transcription factor 16-like isoform X1
SwissprotQ501B25e-63BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2H3YGH51e-175A0A2H3YGH5_PHODC; bZIP transcription factor 16-like isoform X1
STRINGXP_008798444.11e-176(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115063238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.13e-49basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]