PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s1142581g001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family bZIP
Protein Properties Length: 218aa    MW: 23921.2 Da    PI: 7.7826
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s1142581g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.41e-101111542164
                         HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
              bZIP_1  21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                         R R ++e+eeL++kv+eL++eN+aL  ele+l+k++  lk+e+e
  PDK_30s1142581g001 111 RVRNLQECEELARKVAELKNENSALSVELENLQKLCRDLKAENE 154
                         7899************************************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001702.7E-8111154IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.8E-6111151No hitNo description
CDDcd147021.15E-6111147No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MRTEISSFPK HTCYTLKDMP RTMHTCYTLK DMPRTIVAHQ KKRASSLHAL DPPHPTQAHK  60
VLGFPPATLS VELEPFITMS NACAGLQCGM KTDEGLTRMT GFYLCQRIHG RVRNLQECEE  120
LARKVAELKN ENSALSVELE NLQKLCRDLK AENESLEEGL TRFYGAGVAS ALGIKGESSA  180
MPSVGGDDSG HVHRSPVDSN QNTGKFCTGT GNPESTSR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008811316.12e-67G-box-binding factor 1-like isoform X1
RefseqXP_008811318.16e-68G-box-binding factor 1-like isoform X2
TrEMBLA0A2H3ZBF84e-66A0A2H3ZBF8_PHODC; G-box-binding factor 1-like isoform X1
TrEMBLA0A2H3ZBI01e-66A0A2H3ZBI0_PHODC; G-box-binding factor 1-like isoform X2
STRINGXP_008811316.17e-67(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.21e-09G-box binding factor 1