PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr032743.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family Trihelix
Protein Properties Length: 387aa    MW: 42256.3 Da    PI: 9.2691
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr032743.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.36.1e-1622113272
     trihelix   2 WtkqevlaLiearremeerlrrgk.....................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 
                  Wt  e++ Liea++ ++er  ++                       ++ +W++v ++++++g+ r+++qC++kw+nl ++ykk++e e+k t
  Pbr032743.1  22 WTVGETMILIEAKKMDDERRMKRTgggegassgggtdqttrsmskPAELRWKWVEDYCWKKGCLRNQNQCNDKWDNLMRDYKKVREYERKIT 113
                  *************96666555433345566666677777777766999****************************************9975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.0981499IPR017877Myb-like domain
PfamPF138372.0E-1121111No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MAEQGGNGTS RVIMRDYRKG NWTVGETMIL IEAKKMDDER RMKRTGGGEG ASSGGGTDQT  60
TRSMSKPAEL RWKWVEDYCW KKGCLRNQNQ CNDKWDNLMR DYKKVREYER KITNVGKGKG  120
EEGSASYWKL EKNERKERNL PTNMVPQIYE ALVDVVERRE AAAAAAAAGY QIRGHEVVGG  180
ASVSGPNVGI NPNIGYGLER PIINTTNVHQ QPSSSLPSPP VLQHHHHHQI SVPTIAALPL  240
LPPAPLAAQP PPALPYAQVM PTVDSDTSEH SDSPAKRRRR ASGRGGGGGE DQGGTSGTVS  300
ASISSEVGTA IARGASMIAE ALQGCEEREE RRHREMLNLH ERRLQIEETK TEINRQGING  360
LTDAINKLAN SIHALASNKN QQPPPN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr032743.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009341205.10.0PREDICTED: uncharacterized protein LOC103933261
TrEMBLA0A498JTG60.0A0A498JTG6_MALDO; Uncharacterized protein
STRINGXP_009341205.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68043242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-59Trihelix family protein