PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr030541.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 154aa    MW: 17086.7 Da    PI: 7.6589
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr030541.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.2e-212475256
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 +y+GVr+++ +g++++eIrdps++g  +r +lg+f+taeeAa+a+++a+ +l+g+
  Pbr030541.1 24 RYRGVRRRP-WGKFASEIRDPSKQG--ARLWLGTFDTAEEAARAYDKAAFNLRGH 75
                 6********.**********98865..**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.48E-232483IPR016177DNA-binding domain
PROSITE profilePS5103224.6452482IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-322484IPR001471AP2/ERF domain
CDDcd000182.63E-302483No hitNo description
PfamPF008479.7E-152475IPR001471AP2/ERF domain
SMARTSM003803.9E-382488IPR001471AP2/ERF domain
PRINTSPR003679.3E-122536IPR001471AP2/ERF domain
PRINTSPR003679.3E-124864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MENPRRGKDQ EKQGKEEKGS EEVRYRGVRR RPWGKFASEI RDPSKQGARL WLGTFDTAEE  60
AARAYDKAAF NLRGHLATLN FPNEYYAQVM GSHPYPPRFS ALSSSSSSTS SSSAAAPGGS  120
SSAGQGSRQV FEIEYLDNKV LEDLLDYEEE KNK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-33131403114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr030541.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009339610.11e-109PREDICTED: ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC54e-48ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A498HH125e-85A0A498HH12_MALDO; Uncharacterized protein
STRINGXP_009339610.11e-108(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.12e-36ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]