PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr028332.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 418aa    MW: 45321.1 Da    PI: 8.3031
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr028332.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.64.9e-32298351255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Pbr028332.1 298 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 351
                  9****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.97E-15295352IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-28296352IPR009057Homeodomain-like
TIGRFAMsTIGR015572.6E-23298351IPR006447Myb domain, plants
PfamPF002492.3E-7299350IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MLREKGLSSE AAAGGRSCLA LNPIPDLSLH ISPPNTNTNS APSSICTDRV TPDHDSTSCF  60
DIWRRDTDED YTNGAALANK SHSDSCIRAS YTSSSPVAAA ADTELSLANP SALEAESAWK  120
KNYFGGGDGY NDEAKNSGNS VTSSNGISML ERLKPIKGIP VYSTSSTNCS FPPSFSPNPV  180
YQKAPYLSNS FRPAAPARNC SGRGMGMGLG GFNGITMDSL SLGVGGVQQQ QQQHQRQHHF  240
PSYNLNPYYP QQLQQHHCVG GGGNYNADLS SNGFTMRSKF TPPKLIGQNI NKRNMRAPRM  300
RWTTSLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TVKNTDKPLA  360
SSDGSGDEDL LSITNHHHNS NSNGLLNQRG ASNATLNLEH DHMEHRPFNN LWGNSSR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-17299353357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-17299353357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-17299353357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-17299353357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr028332.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018502916.10.0PREDICTED: transcription repressor KAN1-like isoform X2
TrEMBLA0A498JL540.0A0A498JL54_MALDO; Uncharacterized protein
STRINGXP_009355983.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17563391
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.13e-38G2-like family protein