PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr020278.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 386aa    MW: 43619.9 Da    PI: 5.2326
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr020278.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2476.2e-15156203354
          AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                   kGVr++k +g+++AeIrd +     +  r +lg+f taeeAa+a+ + ++++e
  Pbr020278.1 156 PKGVRRRK-WGKYAAEIRDpF-----QgIRKWLGTFNTAEEAAAAYQQKKREFE 203
                  59***998.**********55.....45******************99998876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.871155219IPR001471AP2/ERF domain
PfamPF008472.6E-8156203IPR001471AP2/ERF domain
PRINTSPR003676.0E-7156167IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.0E-19157203IPR001471AP2/ERF domain
SMARTSM003801.7E-14157225IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-15157202IPR016177DNA-binding domain
CDDcd000185.91E-13157187No hitNo description
PRINTSPR003676.0E-7178194IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MSSRFYLSTG APKKLWKSYQ PLFCMHKQIS SVFYMPLRSQ RGFRGFKFKM PGMKTVILNQ  60
HVSWNKLKKK QPTVEENAGY VKRIRIIYND PDATDSSSED DEDYDIEGNL FQHGKRFVSE  120
ILVVETECES SAGTNGGRIG HSTDFYDSKK SNRVLPKGVR RRKWGKYAAE IRDPFQGIRK  180
WLGTFNTAEE AAAAYQQKKR EFETIQSQQR TKSHCENMPL SDKHEFESMQ LTEGAKHELQ  240
SVPLSEESQD SSFCHPSPSS VLEMSGSAAL CIGLERLKEE SGVEVSGGEG TVQQPVFEEE  300
ESIPMLPPLD VEQLNLGCGD NYVFSSLDQF FDGMCDIVDD GMTDTVDYPV CKDKKGEATC  360
LPPLDFNFGQ QDFSWIDQKL EHGKP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156162KGVRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr020278.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU7324380.0GU732438.1 Malus x domestica AP2 domain class transcription factor (AP2D14) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009347079.10.0PREDICTED: ethylene-responsive transcription factor CRF6-like
RefseqXP_009347084.10.0PREDICTED: ethylene-responsive transcription factor CRF6-like
RefseqXP_018500814.10.0PREDICTED: ethylene-responsive transcription factor CRF6-like
TrEMBLA0A498JNV00.0A0A498JNV0_MALDO; Uncharacterized protein
STRINGXP_009347079.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134512027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49120.14e-14ERF family protein