PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr007146.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 188aa    MW: 20920.3 Da    PI: 8.3786
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr007146.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.28.6e-131049245
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45
                 ++ GVr+++ +grWvAeI+d s   ++ r +lg+f+ aeeAa a
  Pbr007146.1 10 RFLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDQAEEAALA 49
                 578******.7*********42...36**************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.48E-21956No hitNo description
SMARTSM003801.1E-161062IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-171050IPR001471AP2/ERF domain
PROSITE profilePS5103213.6831049IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-121153IPR016177DNA-binding domain
PRINTSPR003674.7E-71122IPR001471AP2/ERF domain
PfamPF008471.1E-71349IPR001471AP2/ERF domain
PRINTSPR003674.7E-73349IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MRKGNKNGKR FLGVRQRPSG RWVAEIKDSS QKLRLWLGTF DQAEEAALAN AKTNFPSCHM  60
LNTHEENCSI LRKNPRLYQL LQHAIMKNHA RSSSLNSAKI NPWDRNQIRG IDFDILVEET  120
IVCSSSGAAS TSGQYQGDHD EDRNNKLCAL SFGSCKVYSS VVVAPSFSAS SQCQQAHDEE  180
EKGYQEA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr007146.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008393384.31e-130ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A498I3A31e-128A0A498I3A3_MALDO; Uncharacterized protein
STRINGXP_008393384.11e-128(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF123492734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.18e-19related to AP2 11