PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf01094g00002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 226aa    MW: 25220.2 Da    PI: 10.2637
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf01094g00002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.13.2e-1694144255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y GVr+++ +g ++AeIrdp     k++r +lg+++ +e+Aa a+++a+ +++g
  Peaxi162Scf01094g00002.1  94 RYIGVRRRR-WGTFAAEIRDP---ErKKARLWLGTYDNPEDAALAYDQAAFRFRG 144
                               699***777.**********7...3347************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.7E-1194144IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-2194153IPR016177DNA-binding domain
PROSITE profilePS5103222.5594152IPR001471AP2/ERF domain
SMARTSM003802.4E-3294158IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.4E-2994153IPR001471AP2/ERF domain
PRINTSPR003671.7E-1095106IPR001471AP2/ERF domain
CDDcd000185.22E-23103154No hitNo description
PRINTSPR003671.7E-10134154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MNNPVADETF SFPELNLLES IKQHLLNDSD FSDIFSPLMS SSNNTTLPNS PSSSIGSSNL  60
SLNEKSESDD KEKISTKSPA AVVSEANAPQ DWRRYIGVRR RRWGTFAAEI RDPERKKARL  120
WLGTYDNPED AALAYDQAAF RFRGSKARLN FPHLIGSSNM PKPARLTSKH RMRSPEPASS  180
SSSSSSASTT SSQNEETRKR KIDVINSIAK ARLLCNIWNV QMLVKL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-2293152160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016544939.11e-78PREDICTED: ethylene-responsive transcription factor 2-like
TrEMBLM1DZX16e-78M1DZX1_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000971011e-78(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-30ethylene-responsive element binding factor 13