PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00672g00031.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 225aa    MW: 25102 Da    PI: 9.8769
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00672g00031.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37e-1796146255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y GVr++  +g ++AeIrdp     kr+r +lg+++t+e+Aa a+++a+ k++g
  Peaxi162Scf00672g00031.1  96 RYIGVRRRQ-WGTFAAEIRDP---ErKRARLWLGTYDTPEDAALAYDQAAFKFRG 146
                               699***887.**********7...3347************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.16E-2196155IPR016177DNA-binding domain
CDDcd000186.56E-2896156No hitNo description
PROSITE profilePS5103223.07796154IPR001471AP2/ERF domain
PfamPF008477.0E-1296146IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.8E-3096155IPR001471AP2/ERF domain
SMARTSM003804.8E-3496160IPR001471AP2/ERF domain
PRINTSPR003671.5E-1097108IPR001471AP2/ERF domain
PRINTSPR003671.5E-10136156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MNNPVADETF SFPELDLLES IKLHLLNDSD FSDIFAHVIS SSNNAILPNS PSPSIGSSCP  60
SLESNEKSEF DDQEKITIKS PAVVERAAHA PHDWRRYIGV RRRQWGTFAA EIRDPERKRA  120
RLWLGTYDTP EDAALAYDQA AFKFRGSKAR LNFPHLIGSS NTPNPARLTS RRPVRSPEPA  180
SSSSSSSTST TSSQNAGTRK RRIDLINSIA RAKRFCNSWN VQMLV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-2295159468ATERF1
3gcc_A2e-2295159468ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016544939.11e-78PREDICTED: ethylene-responsive transcription factor 2-like
TrEMBLM1DZX14e-78M1DZX1_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000971016e-79(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.16e-37ethylene-responsive element binding factor 13