PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00613g00021.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 111aa    MW: 12304.6 Da    PI: 5.1541
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00613g00021.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.23.6e-122421355
                       AP2 13 grWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                              g+++AeIrd s    +  r+++g+f +aeeAa+a+++ + +++ 
  Peaxi162Scf00613g00021.1  2 GKFAAEIRDTSR---QgVRVWIGTFNSAEEAARAYDRTAYSMRD 42
                              99*******432...24***********************9985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.712150IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-19251IPR001471AP2/ERF domain
PfamPF008475.9E-8242IPR001471AP2/ERF domain
CDDcd000181.09E-15249No hitNo description
SuperFamilySSF541717.19E-15251IPR016177DNA-binding domain
SMARTSM003801.5E-12256IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MGKFAAEIRD TSRQGVRVWI GTFNSAEEAA RAYDRTAYSM RDHLAILNFS EEYNLPSSSA  60
HFNAGSSTTS SSSMHARMSK IGKFSAAIEQ TSTEYLGEKL LEELLECDQP N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-212582480Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015068552.16e-37ethylene-responsive transcription factor ERF096-like
TrEMBLA0A2G9I9T06e-36A0A2G9I9T0_9LAMI; Uncharacterized protein
STRINGSolyc03g005500.1.12e-35(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-23ERF family protein