PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00479g01010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 195aa    MW: 22916.2 Da    PI: 5.0816
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00479g01010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.71.4e-1487137555
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                               +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L ++l+  ++ 
  Peaxi162Scf00479g01010.1  87 RKQRRMISNRESARRSRMRKQKHLDELWSQVIWLRNENHQLLNKLNDVSES 137
                               689**************************************9776665543 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.1E-1483147IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.57685148IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.5E-1287160No hitNo description
PfamPF001701.8E-1287143IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.19E-1387136No hitNo description
CDDcd147028.74E-2188139No hitNo description
PROSITE patternPS00036090105IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MQPTDVTELY YLLPSNNQPQ HPSQFNSNYD NYISTFIQSS RISSPLHSLQ IGPPIQEINP  60
QTNYFFNCNY STCDETDEQL LTLINERKQR RMISNRESAR RSRMRKQKHL DELWSQVIWL  120
RNENHQLLNK LNDVSESHDQ ALEENAKLKE ETSELRQMVT NMQLMNSSNY PCLRDNFDDE  180
PCSGSSHNEK QNSGD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199106RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009588233.13e-96PREDICTED: basic leucine zipper 43-like
RefseqXP_016484738.13e-96PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC22e-43BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A1S4B7G76e-95A0A1S4B7G7_TOBAC; basic leucine zipper 43-like
STRINGXP_009588233.11e-95(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-47basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]