PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00475g00071.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 231aa    MW: 25785 Da    PI: 9.767
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00475g00071.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.84.1e-1696146255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y GVr++  +g ++AeIrdp     kr+r +lg+++t+e+Aa a+++a+ k++g
  Peaxi162Scf00475g00071.1  96 RYIGVRRRQ-WGTFAAEIRDP---ErKRARLWLGTYDTPEDAAFAYDQAAFKFRG 146
                               699***887.**********7...3347************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.5E-1096146IPR001471AP2/ERF domain
CDDcd000181.06E-2796156No hitNo description
SMARTSM003805.1E-3396160IPR001471AP2/ERF domain
PROSITE profilePS5103222.97296154IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-2996155IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-2196155IPR016177DNA-binding domain
PRINTSPR003671.5E-1097108IPR001471AP2/ERF domain
PRINTSPR003671.5E-10136156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MNNPVADETF FFPELNLLES IKQHLLNDSD FSDIFSPIMS SSNNTTLPNS PSSSIGSSCP  60
SLESNEKSEF DDQQKITTKS PAVVERAANA PHDWRRYIGV RRRQWGTFAA EIRDPERKRA  120
RLWLGTYDTP EDAAFAYDQA AFKFRGSKAR LNFPHLIGSS NMPKPARLTS RCRVCSPEPA  180
SSSSTSTSTT SSQNAGTRKR RIDLINSIAR AKLFCNNAKY CTPIISLLIK L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-2395154160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A7e-2395159468ATERF1
3gcc_A7e-2395159468ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016544939.11e-82PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotQ404794e-33ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A1U8EM333e-81A0A1U8EM33_CAPAN; Ethylene-responsive transcription factor 2
TrEMBLA0A2G3AMD83e-81A0A2G3AMD8_CAPAN; ethylene-responsive transcription factor 2-like
STRINGPGSC0003DMT4000971014e-81(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-34ethylene-responsive element binding factor 13
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]