PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00475g00064.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 594aa    MW: 66348.2 Da    PI: 4.3616
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00475g00064.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.52.1e-15109159255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y GVr+++ +g ++AeIr p     k +r +lg++ t+e+Aa a+++a+ k++g
  Peaxi162Scf00475g00064.1 109 RYIGVRRRR-WGTFAAEIRNP---DrKGARLWLGTYETPEDAALAYDEAAFKIRG 159
                               699***777.**********8...3245*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.576109167IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-28109168IPR001471AP2/ERF domain
PfamPF008473.2E-11109159IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-20109168IPR016177DNA-binding domain
SMARTSM003803.4E-32109173IPR001471AP2/ERF domain
PRINTSPR003676.0E-10110121IPR001471AP2/ERF domain
CDDcd000189.03E-23118169No hitNo description
PRINTSPR003676.0E-10149169IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    Send to blast
MNNPADHESF SFSDLNFLES IKQQLLNDSD FSDMFSPTSS SNNALLNSPN SSFGSCLSAT  60
KSFESYILNE NIEETTLTNL DNSLEKSESE EETRDVVARE RNAPQDWRRY IGVRRRRWGT  120
FAAEIRNPDR KGARLWLGTY ETPEDAALAY DEAAFKIRGS KARLNFPHLI GSNMPKPARV  180
TSRRSRVRSP EPASSSSSTS SQNTRTRKSK IDVINSIAKA KWFDITMESE DVFSRKNQEN  240
VIFTKIEPSE AEIASFKLLE FKPYNIDPKI AVDPISDDAT GGNLNPPRAE TGHQSSSNRD  300
NQRLSPEIQL LYGQQKLLQA DMSLEIDPEE IEESNGFNGA FGSDHVRNDE RNKQTPEPLD  360
LQQDHHFQHN FAYQFYGPAE KQPYVSHDQS DIPVGNDGDN LEDVTKDPHG MDHVFEADFD  420
GIDMVDPKEA VVDHQHLFND SGHQSYGLDM RKSTDASEER HKIYHGDGGE FDGVAVVDPK  480
DLVEEHERMI SDATDNVDGI DHINPQGNEE LQHDKDVNSD AVGQQNIEDE GLNIHVPPAD  540
GLDNDIGNVD PINACPDTVV TGAFGKGTLP TEKQNLDVDE GLNIHVAPSD DVFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-24108167160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-26ethylene-responsive element binding factor 13