PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00271g00062.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 176aa    MW: 19940 Da    PI: 8.6655
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00271g00062.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.8e-1898148255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y+GVr+++ +g+++AeIrdp+      r++lg++ t  +Aa+a++ a+ k++g
  Peaxi162Scf00271g00062.1  98 HYRGVRRRP-WGKYAAEIRDPTRK--GSRVWLGTYETDVDAARAYDCAAFKMRG 148
                               8********.**********8542..4**********99*************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-3197156IPR001471AP2/ERF domain
CDDcd000183.79E-3097156No hitNo description
SMARTSM003802.3E-3698162IPR001471AP2/ERF domain
PfamPF008478.3E-1398148IPR001471AP2/ERF domain
PROSITE profilePS5103224.44798156IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-2398157IPR016177DNA-binding domain
PRINTSPR003674.4E-1399110IPR001471AP2/ERF domain
PRINTSPR003674.4E-13138158IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:1902074Biological Processresponse to salt
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MKTTIEDQEL TLELISQHLL GDFTSTESFI NSLDFCFSSL SDNYHYQPNN FDQDFPEFET  60
KPNITLSPVT SANTSASSNT TNDSSLNNNT VDDGKKKHYR GVRRRPWGKY AAEIRDPTRK  120
GSRVWLGTYE TDVDAARAYD CAAFKMRGRK AILNFPFDAG KSVPPANIGQ KRRRNN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-2995157264ATERF1
3gcc_A9e-2995157264ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ2596030.0HQ259603.1 Petunia x hybrida ethylene-responsive-element-binding factor 9 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009804349.12e-82PREDICTED: ethylene-responsive transcription factor ERF106
RefseqXP_016491251.12e-82PREDICTED: ethylene-responsive transcription factor ERF106-like
SwissprotQ9LY051e-46EF106_ARATH; Ethylene-responsive transcription factor ERF106
TrEMBLE3VVR81e-122E3VVR8_PETHY; Ethylene-responsive-element-binding factor 9
STRINGXP_009804349.17e-82(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.17e-45ERF family protein
Publications ? help Back to Top
  1. Kim H,Go YS,Suh MC
    DEWAX2 Transcription Factor Negatively Regulates Cuticular Wax Biosynthesis in Arabidopsis Leaves.
    Plant Cell Physiol., 2018. 59(5): p. 966-977
    [PMID:29425344]