PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00258g00009.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 538aa    MW: 60622.3 Da    PI: 7.9514
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00258g00009.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64.1e-11209245541
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 
                               k  rr+++NReAAr+sR+RKka++++Le     L++ 
  Peaxi162Scf00258g00009.1 209 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLTQL 245
                               7789***********************9855555444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.8E-8202251No hitNo description
SMARTSM003381.4E-7205267IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.266207251IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-7209252No hitNo description
CDDcd147081.26E-22209261No hitNo description
PfamPF001706.7E-8209247IPR004827Basic-leucine zipper domain
PROSITE patternPS000360212227IPR004827Basic-leucine zipper domain
PfamPF141446.3E-31300372IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    Send to blast
MGFERAAFVE SSSPEQENNK LFVDMMDSPN NNQISFGGQH QHQQQFFHVP HHHQQQQNNQ  60
ISFGMMQQQS SSTIPGSLIS KDSAGAYDLG ELDQALFQYL DGQDPSSIQE QQRQNSGMRP  120
PTLNIFPSQP MHVEPSSTKG NNTGIVSPAI SGSKRSSQPS MELSNPKNND VASASVGPEP  180
PKSAKREGNR KGPTSSSEQD NAPKTPDPKT LRRLAQNREA ARKSRLRKKA YVQQLESSRI  240
RLTQLEQELQ RARSQGYYLS GGALLGGDQS LPVNMGNISS DAAVFDMEYT RWLEEHHRLM  300
CELRNAVQEH FPENELRIYV ENCVAHYDEI MNLKSMLAKS DVFHLVSGLW KTPAERCFMW  360
MGGFRPSELL KVRIRNKTLT ENYITMKFTN IIMHANPSYK RNVLTNNGLI ILSQIEPLTE  420
QQLMGICGLQ QSTQEAEDAL SQGLEALNHS LSDTIASDAL ACPQNMANYM GQMALAMNKL  480
STLEGFVRQA DNLRHQTIHR LHQLLTTRQA ARCFLAIAEY FHRLRALSSL WLARPRQE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY9980180.0AY998018.1 Nicotiana tabacum TGA10 transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009611363.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
SwissprotQ415581e-123HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLQ52MZ20.0Q52MZ2_TOBAC; TGA10 transcription factor
STRINGSolyc10g078670.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-171bZIP family protein