PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00241g01010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family TCP
Protein Properties Length: 259aa    MW: 29244.4 Da    PI: 6.852
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00241g01010.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP116.73e-3621160289
                       TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............ssssase 72 
                               + +kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+++              +      
  Peaxi162Scf00241g01010.1  21 TSRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDMQDRLGYDRPSKAVDWLINKAKNAIDKLAELppwhpnddgvvnnmP------ 99 
                               679*************************************************************877776665554331...... PP

                       TCP  73 ceaesssssasnsssg............................................k 89 
                               ++ae++++s++++s +                                            +
  Peaxi162Scf00241g01010.1 100 TSAEADVNSTETQSVPdtsklffpmnsgtslmnflsfpyevmsresiqiedlglslhsnsH 160
                               2445555555555555555566667777777777777777777777666666665544322 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.7E-3421171IPR005333Transcription factor, TCP
PROSITE profilePS5136932.8862381IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MKRATGEEIV QVEGGHILRS TSRKDRHSKV YTAKGPRDRR VRLSAHTAIQ FYDMQDRLGY  60
DRPSKAVDWL INKAKNAIDK LAELPPWHPN DDGVVNNMPT SAEADVNSTE TQSVPDTSKL  120
FFPMNSGTSL MNFLSFPYEV MSRESIQIED LGLSLHSNSH DQNSNHRTSN TDQSPFSNPN  180
PVSFEATYPR MTNWILPHQQ LFSQGGALFS HREPLQSNFS QLIHACEQRP MAGAHHQSSI  240
FNESFQFPAR IHGEVENGV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009624544.11e-115PREDICTED: transcription factor TCP4-like isoform X1
RefseqXP_009624545.11e-115PREDICTED: transcription factor TCP4-like isoform X1
SwissprotQ8LPR51e-46TCP4_ARATH; Transcription factor TCP4
TrEMBLM1AJX32e-93M1AJX3_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000243286e-93(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66072234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.37e-48TCP family protein