PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00158g00052.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 172aa    MW: 19681.7 Da    PI: 10.5631
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00158g00052.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.4e-2057107155
                       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                               ++y+GVr++k +g+WvAe+rd ++   ++r++lg+f+taeeAa a+++a  +++g
  Peaxi162Scf00158g00052.1  57 KKYRGVRRRK-WGKWVAEVRDIRW---KTRIWLGTFDTAEEAALAYDKAVIEMRG 107
                               59*****998.**********544...6************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.54E-3057113No hitNo description
Gene3DG3DSA:3.30.730.104.3E-2858113IPR001471AP2/ERF domain
PfamPF008472.8E-1458107IPR001471AP2/ERF domain
PROSITE profilePS5103221.64158115IPR001471AP2/ERF domain
SMARTSM003802.2E-3258121IPR001471AP2/ERF domain
SuperFamilySSF541716.41E-2158114IPR016177DNA-binding domain
PRINTSPR003676.5E-125970IPR001471AP2/ERF domain
PRINTSPR003676.5E-128197IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MTYHQSKVGE SSEGKKPEKH EKTCGMEIII ENGKTKVIPR KVSKENKDIK LLGGNAKKYR  60
GVRRRKWGKW VAEVRDIRWK TRIWLGTFDT AEEAALAYDK AVIEMRGVDA VTNILKPPTR  120
DLPSREINFI NPSPRENSFI SPRPREINII GPGPREINFM ELPSSPTNDT RV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1852114871Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016500458.16e-47PREDICTED: ethylene-responsive transcription factor CRF2-like
TrEMBLA0A1S4CH451e-45A0A1S4CH45_TOBAC; ethylene-responsive transcription factor CRF2-like
STRINGXP_009627598.14e-46(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.17e-25cytokinin response factor 4