PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00145g00045.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 352aa    MW: 38781.9 Da    PI: 6.7856
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00145g00045.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-171160255
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                              +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  Peaxi162Scf00145g00045.1 11 KYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 60
                              8********.**********93....35999**********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.47E-301167No hitNo description
PROSITE profilePS5103222.0621168IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-291167IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-211168IPR016177DNA-binding domain
PfamPF008471.3E-101160IPR001471AP2/ERF domain
SMARTSM003803.6E-341174IPR001471AP2/ERF domain
PRINTSPR003671.9E-91223IPR001471AP2/ERF domain
PRINTSPR003671.9E-93450IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MRNIVSEFLY KYRGVRRRPW GRYAAEIRDP QSKERRWLGT FDTAEEAACA YDCAARAMRG  60
VKARTNFVYP PTHQTTSTNE NFLNIPSFNY TSSHVKSSLP TKQLYHSSSF LNPYGSTSTR  120
ANNGLVGSCQ KTNDSLNTLL LRELLITNSS NITNSLSSNS SLNNMTNVTS LPLYENLPNF  180
MLSRDTSSGS VSSTSLMNQT CSSTFLPTSS NAISSSSIMT LPKFENLHSV NSNSTIDDHS  240
GMDFFPSDPS DNSGLLEEAL NGFFPKPKPM KSEPLGPLTS NISTKSQAAG VSTISQQNID  300
GLNSGFDFEF SQTYQHDFQA NPQVSSVENN VMGDTFQYPE LLSIFAAKLQ NA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-2011671471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019264879.11e-126PREDICTED: ethylene-responsive transcription factor ABI4-like
TrEMBLA0A314L3591e-125A0A314L359_NICAT; Uncharacterized protein
STRINGXP_009598275.11e-121(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.19e-25DORNROSCHEN-like