PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00134g00033.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 144aa    MW: 16330.9 Da    PI: 5.2803
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00134g00033.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-201868255
                       AP2  2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              +y+GVr ++ +g+++AeIrd  + ng   r++lg++ taeeAa+a+++a+ +++g
  Peaxi162Scf00134g00033.1 18 KYRGVRKRP-WGKYAAEIRDT-NrNG--VRVWLGTYATAEEAARAYDKAAFEMRG 68
                              8********.**********4.3254..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.06E-281877No hitNo description
SuperFamilySSF541711.05E-231878IPR016177DNA-binding domain
PfamPF008471.8E-141868IPR001471AP2/ERF domain
SMARTSM003806.0E-361882IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.4E-311878IPR001471AP2/ERF domain
PROSITE profilePS5103223.9731876IPR001471AP2/ERF domain
PRINTSPR003674.0E-111930IPR001471AP2/ERF domain
PRINTSPR003674.0E-114258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MDEDNSNANK ETEGREVKYR GVRKRPWGKY AAEIRDTNRN GVRVWLGTYA TAEEAARAYD  60
KAAFEMRGRF AVLNFPHEYP SFPSCNSLSS SSSFLSSSSA SSSSTCSSVH NVHHEVKQVI  120
EFEYLDDNLL EDLLGLEYEN TQFK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-331812914114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016567930.12e-60PREDICTED: ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC52e-37ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2G2X5X77e-60A0A2G2X5X7_CAPBA; Ethylene-responsive transcription factor
STRINGXP_009785394.13e-47(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.18e-23ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]