PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00085g00045.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Dof
Protein Properties Length: 334aa    MW: 36231.7 Da    PI: 8.3943
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00085g00045.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.39.5e-402787262
                    zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                              +e+al+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk +
  Peaxi162Scf00085g00045.1 27 QEQALNCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIK 87
                              57899*****************************************************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074788.0E-272485IPR003851Zinc finger, Dof-type
PfamPF027011.6E-332985IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.4223185IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103369IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010052Biological Processguard cell differentiation
GO:0010118Biological Processstomatal movement
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1902066Biological Processregulation of cell wall pectin metabolic process
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MTSQENKEES GQSSGGGRKT SSASRPQEQA LNCPRCDSPN TKFCYYNNYS LSQPRHFCKT  60
CRRYWTKGGA LRNVPIGGGC RKNKKIKTSS SSRLSVDSKD TSVSSDIGGL KFFHGLSPAM  120
DFQLGGLNFP RLSSTSSTSG SIFNQFSTFG DISTTSAPIG STSCFSLDPS GSCSGSLLGF  180
NSFPFSNSLL KQGDTMASSI ESLSSINQDL HWKLQQQRLA MLFGGENQKE SNLVSSVGLE  240
NQIQKPQPIL FQNLEISSKA EEEAAAFGNN INSRKDHGTG SHGNNNLSTE WFFDNSFNPT  300
STNSSSGNIA NDQNTTNWNS IQAWSNLNQY STLP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754505e-51HG975450.1 Solanum pennellii chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009774290.10.0PREDICTED: dof zinc finger protein DOF5.7
RefseqXP_016448543.10.0PREDICTED: dof zinc finger protein DOF5.7
TrEMBLA0A1S3Y9910.0A0A1S3Y991_TOBAC; dof zinc finger protein DOF5.7
TrEMBLA0A1U7WJ670.0A0A1U7WJ67_NICSY; dof zinc finger protein DOF5.7
STRINGXP_009774290.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52422234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.12e-61Dof family protein