PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00078g00042.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 176aa    MW: 19467.7 Da    PI: 5.0502
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00078g00042.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.72.1e-211566156
                       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                              s y+GVr +k +g+Wv+eIr+p   gk++r++lg+f+t+e+Aa+a++aa++ l+g+
  Peaxi162Scf00078g00042.1 15 SPYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFDTPEMAAAAYDAAALHLRGH 66
                              68*****999.**********8...557**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.01E-231574IPR016177DNA-binding domain
PROSITE profilePS5103223.0771673IPR001471AP2/ERF domain
SMARTSM003806.1E-361679IPR001471AP2/ERF domain
PRINTSPR003672.6E-101728IPR001471AP2/ERF domain
PfamPF008473.5E-141766IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-321774IPR001471AP2/ERF domain
CDDcd000182.60E-231775No hitNo description
PRINTSPR003672.6E-103955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MEENNKSSKG GGITSPYRGV RKRKWGKWVS EIREPGKKTR IWLGSFDTPE MAAAAYDAAA  60
LHLRGHAARL NFPELVDYIT KPASSSPEDV RLAAQEAALR VKMSTGSLES HQEMGSSSHA  120
TNNLAPVTIG LSPSQIQAIN DFPMDSPKMW SDIGEEAMFT SNDYEMNDYD DCLWDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-171777667ATERF1
3gcc_A5e-171777667ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019244673.15e-90PREDICTED: ethylene-responsive transcription factor ERF021
SwissprotQ9C9I22e-54ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A1J6JBN51e-88A0A1J6JBN5_NICAT; Ethylene-responsive transcription factor erf021
STRINGXP_009757757.17e-89(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.11e-43ERF family protein