PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00074g01736.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 275aa    MW: 30930.5 Da    PI: 4.4076
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00074g01736.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY43.94.9e-141131522159
                               -EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY  21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                rsYYrC+s+ gC ++k+ve+s ++p  +++tY+ eHnh+
  Peaxi162Scf00074g01736.1 113 KRSYYRCSSSkGCLARKQVEQSCNEPGNFIVTYTAEHNHS 152
                               69******998****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007749.4E-8110153IPR003657WRKY domain
SuperFamilySSF1182901.44E-12111154IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.4E-15112154IPR003657WRKY domain
PfamPF031068.3E-12112151IPR003657WRKY domain
PROSITE profilePS5081118.131114154IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MAQCSDWCLQ AVVKGSSNID SKSCNFSLLD FQESEYLTFS EMKMEVVGDE LEELYKPFYP  60
VDGQNIVMAS SISCPKEPKE EKIEEIFHQQ QGCINESFSL NMAGAVYVPK YKKRSYYRCS  120
SSKGCLARKQ VEQSCNEPGN FIVTYTAEHN HSQPTRRNSL AGTIKTKFPT SKSPVNSGSP  180
KMLQPKISSP QYGSPTTLLN VEPNVHKDEF PEIEINQENI IIGDYNEEIR MFEGSDENDY  240
VSVQDMFDGD FFAGLEDIDG FNSSFGCNIS MSPFS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009764282.11e-103PREDICTED: probable WRKY transcription factor 29
RefseqXP_016483102.11e-103PREDICTED: probable WRKY transcription factor 29
TrEMBLM1AWU61e-82M1AWU6_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000320913e-82(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57812335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-15WRKY family protein