PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00016g00183.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 281aa    MW: 31435.8 Da    PI: 7.2914
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00016g00183.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.1e-21146195255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                y+GVr+++ +g+W+AeIrdp+    + +r++lg+f taeeAa+a+++a+ +++g
  Peaxi162Scf00016g00183.1 146 NYRGVRQRP-WGKWAAEIRDPR----KaTRVWLGTFNTAEEAARAYDKAAIEFRG 195
                               59*******.**********94....36************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.17E-35145202No hitNo description
PfamPF008476.7E-15146195IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-23146203IPR016177DNA-binding domain
PROSITE profilePS5103224.935146203IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-32146203IPR001471AP2/ERF domain
SMARTSM003808.4E-39146209IPR001471AP2/ERF domain
PRINTSPR003672.6E-12147158IPR001471AP2/ERF domain
PRINTSPR003672.6E-12169185IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0050832Biological Processdefense response to fungus
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MQKSNKRFRQ EGTSNIVENN QQIQQFPRLT GDQEYSVMVT ALQNVINGSV PMENTPQFNL  60
FSPFQYVTTT TTTATASNSP SSSMSTSFEQ VLGVVAEQEP CKFCRIKGCL GCDIFGTTSN  120
TAAAVVTDDN KKKNTNIAIG KKKKKNYRGV RQRPWGKWAA EIRDPRKATR VWLGTFNTAE  180
EAARAYDKAA IEFRGPRAKL NFSFADYTEN IQEQQQSTSY SAPPQLQQLE PQVQQGNNNN  240
AEFGHEIWDQ LMGDNEIQDW LTMMNFNGDS SDSTGGNVHS V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-23145202159ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130144KKKNTNIAIGKKKKK
2139145GKKKKKN
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00469DAPTransfer from AT4G34410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009609381.11e-137PREDICTED: ethylene-responsive transcription factor ERF109-like
TrEMBLA0A1S4CMZ71e-135A0A1S4CMZ7_TOBAC; ethylene-responsive transcription factor ERF109-like
STRINGXP_009609381.11e-136(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.16e-31redox responsive transcription factor 1